Starfleet Order 002: Starfleet
regulation against the taking of
intelligent life. (TOS:
"One
of Our Planets is Missing")
Starfleet Order 104: Paragraph B -
In the absence of a starship's assigned
captain, a flag officer has the
authority to assume command of the
starship should he deem it necessary. (TOS:
"The
Doomsday Machine")
Starfleet Order 104: Section C -
Should it be proven with admissible
evidence that the flag officer who has
assumed command is medically or
psychologically unfit for command, the
starship's ranking officer may relieve
him on that basis. (ENT:
"Hatchery";
TOS:
"The
Doomsday Machine")
Starfleet Order 2005: Orders the
destruction of a Starship by allowing
Matter/Antimatter to mix in an
uncontrolled manner. This is a last
resort for a captain that allows him/her
to prevent their ship or crew from
falling into enemy hands. (Star
Trek: The Motion Picture)
Special Order 66715: Federation
order that states: "[Starfleet has] the
authority to neutralize security threats
to
Deep
Space 9 by any means
necessary". (DS9:
"Inquisition")
This might not actually be a real
Order. Nevertheless, considering the
importance of the keeping the station
under Federation control during the
Dominion War, may also
very well be a real Order.
Procedure Q: If a state of deep
hostility exists, a landing party is to
beam down fully armed and ready for any
kind of trouble. (TOS:
"Bread
and Circuses")